602889dacfc8b85581ac7e27129f982235b54b7e,scanpy/data_structs/data_graph.py,DataGraph,__init__,#DataGraph#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#,205

Before Change


            else:
                self.k = None  // currently do not store this, is unknown
            // for output of spectrum
            self.X_diffmap = adata.get_multicol_field_smp("X_diffmap")[:, :n_dcs-1]
            self.evals = np.r_[1, adata.add["diffmap_evals"][:n_dcs-1]]
            self.rbasis = np.c_[adata.smp["X_diffmap0"][:, None],
                                adata.get_multicol_field_smp("X_diffmap")[:, :n_dcs-1]]

After Change


            else:
                self.k = None  // currently do not store this, is unknown
            // for output of spectrum
            self.X_diffmap = adata.smpm["X_diffmap"][:, :n_dcs-1]
            self.evals = np.r_[1, adata.add["diffmap_evals"][:n_dcs-1]]
            self.rbasis = np.c_[adata.smp["X_diffmap0"].values[:, None],
                                adata.smpm("X_diffmap")[:, :n_dcs-1]]
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 4

Non-data size: 3

Instances


Project Name: theislab/scanpy
Commit Name: 602889dacfc8b85581ac7e27129f982235b54b7e
Time: 2017-11-11
Author: f.alex.wolf@gmx.de
File Name: scanpy/data_structs/data_graph.py
Class Name: DataGraph
Method Name: __init__


Project Name: theislab/scanpy
Commit Name: 602889dacfc8b85581ac7e27129f982235b54b7e
Time: 2017-11-11
Author: f.alex.wolf@gmx.de
File Name: scanpy/preprocessing/simple.py
Class Name:
Method Name: pca


Project Name: theislab/scanpy
Commit Name: 602889dacfc8b85581ac7e27129f982235b54b7e
Time: 2017-11-11
Author: f.alex.wolf@gmx.de
File Name: scanpy/data_structs/data_graph.py
Class Name: DataGraph
Method Name: init_iroot_and_X


Project Name: theislab/scanpy
Commit Name: 602889dacfc8b85581ac7e27129f982235b54b7e
Time: 2017-11-11
Author: f.alex.wolf@gmx.de
File Name: scanpy/tools/tsne.py
Class Name:
Method Name: tsne