9355ea209c2664ee3c2565431f50b960816ea59a,prody/proteins/pdbclusters.py,,loadPDBClusters,#Any#,22

Before Change

                PDB_CLUSTERS_UPDATE_WARNING = False
        inp = openFile(filename)
        clusters = inp.read()
        try:
            clusters = clusters.decode()
        except (UnicodeDecodeError, AttributeError):
            pass
        PDB_CLUSTERS[sqid] = clusters
        inp.close()

After Change

        clusters = []
        for cluster_str in clusters_str.split("\n"):
            cluster_str = cluster_str.strip()
            if len(cluster_str):
                cluster = [tuple(item.split("_")) for item in cluster_str.split()]
                clusters.append(cluster)

        PDB_CLUSTERS[sqid] = clusters
        inp.close()

    if sqid is None:

Instances