2c11eb164988b6beda5805d2c5034ac91982cc70,lib/cli.py,DirectoryProcessor,parse_arguments,#DirectoryProcessor#Any#Any#Any#,234

Before Change

                                dest="alignments_path",
                                help="optional path to alignments file.")

        self.parser.add_argument("-v", "--verbose",
                            action="store_true",
                            dest="verbose",
                            default=False,
                            help="Show verbose output")
        self.parser = self.add_optional_arguments(self.parser)
        self.parser.set_defaults(func=self.process_arguments)

    def create_parser(self, subparser, command, description):

After Change

        raise NotImplementedError()

    def parse_arguments(self, description, subparser, command):
        for option in self.argument_list:
            args = option["opts"]
            kwargs = {key: option[key] for key in option.keys() if key != "opts"}
            self.parser.add_argument(*args, **kwargs)
        
        self.parser = self.add_optional_arguments(self.parser)
        self.parser.set_defaults(func=self.process_arguments)

    def create_parser(self, subparser, command, description):

Instances