f82113f76793283803e6e7b5f2493c249dbca667,scanpy/tests/test_filter_rank_genes_groups.py,,test_filter_rank_genes_groups,#,26
Before Change
)
rank_genes_groups(adata, "bulk_labels", method="wilcoxon", pts=True, n_genes=5)
filter_rank_genes_groups(adata)
assert np.array_equal(
names_no_reference,
np.array(adata.uns["rank_genes_groups_filtered"]["names"].tolist()),
After Change
)
rank_genes_groups(adata, "bulk_labels", method="wilcoxon", n_genes=5)
filter_rank_genes_groups(**args)
assert np.array_equal(
names_no_reference,
np.array(adata.uns["rank_genes_groups_filtered"]["names"].tolist()),
In pattern: SUPERPATTERN
Frequency: 3
Non-data size: 2
Instances
Project Name: theislab/scanpy
Commit Name: f82113f76793283803e6e7b5f2493c249dbca667
Time: 2020-10-16
Author: koncopd@gmail.com
File Name: scanpy/tests/test_filter_rank_genes_groups.py
Class Name:
Method Name: test_filter_rank_genes_groups
Project Name: theislab/scanpy
Commit Name: f82113f76793283803e6e7b5f2493c249dbca667
Time: 2020-10-16
Author: koncopd@gmail.com
File Name: scanpy/tests/test_filter_rank_genes_groups.py
Class Name:
Method Name: test_filter_rank_genes_groups