2ee3017cf85e5e274e74e34b5539e56ef72562b0,deepvariant/labeler/positional_labeler_test.py,PositionalVariantLabelerTest,test_match_selects_variant_by_start,#PositionalVariantLabelerTest#,180

Before Change

    ]
    candidate = test_utils.make_variant(start=21, alleles=["CC", "A"])

    labeler = self._make_labeler(overlapping, None)
    is_confident, truth_variant = labeler._match(candidate)
    self.assertEqual(is_confident, True)
    self.assertEqual(truth_variant, overlapping[1])

After Change

    ]
    candidate = test_utils.make_variant(start=21, alleles=["CC", "A"])

    labeler = self._make_labeler(
        overlapping,
        ranges.RangeSet(
            [ranges.make_range(overlapping[0].reference_name, 0, 100)]))
    is_confident, truth_variant = labeler._match(candidate)
    self.assertEqual(is_confident, True)
    self.assertEqual(truth_variant, overlapping[1])

Instances