63d8db941c87501296c0e8c73c7871541455571a,prody/dynamics/functions.py,,calcENM,#,411

Before Change


    else:
        trim = str(trim).lower().strip()

    if trim == "trim" and select is not None:
        if isinstance(select, AtomSubset):
            atoms = select
        else:
            atoms = atoms.select(str(select))
    
    enm = None
    if model == "anm":
        anm = ANM(title)
        anm.buildHessian(atoms, gamma=gamma, **kwargs)

After Change


    :type trim: str
    
    
    if isinstance(select, (str, AtomSubset)):
        if not isinstance(atoms, Atomic):
            raise TypeError("atoms must be a Atomic instance in order to be selected")
    try:
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 3

Non-data size: 3

Instances


Project Name: prody/ProDy
Commit Name: 63d8db941c87501296c0e8c73c7871541455571a
Time: 2020-06-09
Author: shz66@pitt.edu
File Name: prody/dynamics/functions.py
Class Name:
Method Name: calcENM


Project Name: kymatio/kymatio
Commit Name: 5f0a67ce3c2d01a2da19b18f2f0834bb31c35182
Time: 2019-03-02
Author: edouard.oyallon@centralesupelec.fr
File Name: kymatio/scattering2d/backend/backend_torch.py
Class Name: Pad
Method Name: __call__


Project Name: kymatio/kymatio
Commit Name: 5f0a67ce3c2d01a2da19b18f2f0834bb31c35182
Time: 2019-03-02
Author: edouard.oyallon@centralesupelec.fr
File Name: kymatio/scattering2d/backend/backend_skcuda.py
Class Name: Pad
Method Name: __call__