d061a0083e3b4a0275cadd9f7e1bdbd8b0132182,nilearn/plotting/tests/test_surf_plotting.py,,test_load_surf_data_file_freesurfer,#,70

Before Change

    filename_thick = tempfile.mktemp(suffix=".thickness")
    nb.freesurfer.io.write_morph_data(filename_thick, data)
    assert_array_equal(load_surf_data(filename_thick), np.zeros((20, )))
    os.remove(filename_thick)

    // test loading of data from real label and annot files
    label_start = np.array([5900, 5899, 5901, 5902, 2638])
    label_end = np.array([8756, 6241, 8757, 1896, 6243])

After Change

    // We test load_surf_data by creating fake data with function
    // "write_morph_data" that works only if nibabel
    // version is recent with nibabel >= 2.1.0
    if LooseVersion(nb.__version__) >= LooseVersion("2.1.0"):
        data = np.zeros((20, ))
        filename_sulc = tempfile.mktemp(suffix=".sulc")
        nb.freesurfer.io.write_morph_data(filename_sulc, data)
        assert_array_equal(load_surf_data(filename_sulc), np.zeros((20, )))
        os.remove(filename_sulc)

        filename_thick = tempfile.mktemp(suffix=".thickness")
        nb.freesurfer.io.write_morph_data(filename_thick, data)
        assert_array_equal(load_surf_data(filename_thick), np.zeros((20, )))
        os.remove(filename_thick)

    // test loading of data from real label and annot files
    label_start = np.array([5900, 5899, 5901, 5902, 2638])
    label_end = np.array([8756, 6241, 8757, 1896, 6243])
    label = load_surf_data(os.path.join(datadir, "test.label"))
    assert_array_equal(label[:5], label_start)

Instances