2ddf94e48476ff253260a3364f76ee13a932e252,src/pyscenic/binarization.py,,plot_binarization,#,47

Before Change

    auc_mtx[regulon_name].hist(bins=bins)
    if threshold is None:
        threshold = _derive_threshold(auc_mtx, regulon_name)
    ylim = plt.ylim()
    plt.plot([threshold]*2, ylim, "r:")
    plt.ylim(ylim)
    plt.xlabel("AUC")
    plt.ylabel("//")

After Change

    :param bins: The number of bins to use in the AUC histogram.
    :param threshold: The threshold to use for binarization. If None then this will be derived automatically.
    
    if ax is None:
        ax=plt.gca()
    auc_mtx[regulon_name].hist(bins=bins,ax=ax)
    if threshold is None:
        threshold = _derive_threshold(auc_mtx, regulon_name)

Instances